Basic Information
Locus ID:
evm.TU.LG04.2545
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
domain in TBC and LysM domain containing proteins
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 43123337 | 43129525 | + | evm.TU.LG04.2545 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.93 | 34,684.99 Da | 47.07 | 74.90 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07534 | TLD | 169 | 306 | 8.5E-31 | IPR006571 |
| SMART | SM00584 | 109ultra | 143 | 307 | 1.6E-30 | IPR006571 |
| ProSiteProfiles | PS51886 | TLDc domain profile. | 144 | 307 | 25.777775 | IPR006571 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 88 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 73 | 88 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G05590.2 | TLD-domain containing nucleolar protein. | 0 |
| RefSeq | XP_021725641.1 | oxidation resistance protein 1-like [Chenopodium quinoa] | 0 |
| B4F6Q9 | Oxidation resistance protein 1 OS=Xenopus laevis OX=8355 GN=oxr1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803MTU3 | TLDc domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology