Basic Information
Locus ID:
evm.TU.LG04.238
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Leucine-rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG04 | 2372007 | 2373215 | + | evm.TU.LG04.238 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.40 | 44,048.23 Da | 38.89 | 107.96 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 73 | 1.9E-8 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 197 | 212 | 0.14 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 130 | 188 | 8.0E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 42 | 374 | 1.93E-41 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 196 | 5.6E-36 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 197 | 378 | 7.1E-27 | IPR032675 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 153 | 175 | 7.080498 | IPR001611 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_012092328.1 | LRR receptor-like serine/threonine-protein kinase SIK1 [Jatropha curcas] | 0 |
| TrEMBL | A0A127AUF3 | LRR-RLK OS=Vernicia fordii OX=73154 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology