Basic Information
Locus ID:
evm.TU.LG04.2274
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 40398084 | 40403788 | - | evm.TU.LG04.2274 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.25 | 98,601.39 Da | 49.12 | 79.04 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 63 | 218 | 5.23739E-47 | - |
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 806 | 847 | 1.82259E-23 | - |
| Pfam | PF04564 | U-box domain | 803 | 872 | 7.6E-18 | IPR003613 |
| Pfam | PF00069 | Protein kinase domain | 523 | 771 | 1.8E-41 | IPR000719 |
| SUPERFAMILY | SSF57850 | RING/U-box | 800 | 872 | 6.18E-23 | - |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 61 | 189 | 1.59E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 494 | 773 | 1.24E-67 | IPR011009 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 52 | 190 | 9.3E-7 | IPR014729 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 802 | 875 | 6.9E-27 | IPR013083 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 503 | 590 | 4.8E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 591 | 790 | 5.7E-48 | - |
| SMART | SM00504 | Ubox_2 | 805 | 868 | 1.6E-27 | IPR003613 |
| SMART | SM00220 | serkin_6 | 518 | 784 | 6.6E-36 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 801 | 875 | 34.544224 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 518 | 785 | 34.95834 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 524 | 545 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 636 | 648 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 227 | 253 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 306 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 233 | 253 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 310 | - | - |
| Coils | Coil | Coil | 369 | 487 | - | - |
| Coils | Coil | Coil | 341 | 365 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_021849995.1 | U-box domain-containing protein 33-like isoform X2 [Spinacia oleracea] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803M2X4 | RING-type E3 ubiquitin transferase OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology