Basic Information
Locus ID:
evm.TU.LG04.2262
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Fasciclin-like arabinogalactan protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG04 | 43905642 | 43906868 | + | evm.TU.LG04.2262 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 44,065.80 Da | 31.29 | 96.37 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 201 | 329 | 8.6E-13 | IPR000782 |
| Pfam | PF02469 | Fasciclin domain | 39 | 112 | 1.1E-6 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 33 | 140 | 4.05E-16 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 199 | 329 | 5.76E-18 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 26 | 175 | 1.1E-10 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 192 | 330 | 9.8E-9 | IPR036378 |
| SMART | SM00554 | fasc_3 | 226 | 330 | 4.5E-15 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 188 | 327 | 10.611813 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 27 | 179 | 11.943115 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 364 | 379 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 338 | 363 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 338 | 384 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12730.1 | FASCICLIN-like arabinogalactan 2. AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds | 0 |
| RefSeq | XP_031264811.1 | fasciclin-like arabinogalactan protein 2 [Pistacia vera] | 0 |
| Q9SU13 | Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLA2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7HF20 | Fasciclin-like arabinogalactan protein 2 OS=Acer yangbiense OX=1000413 GN=EZV62_020797 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology