Basic Information
Locus ID:
evm.TU.LG04.2125
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Small ubiquitin-related modifier
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG04 | 42522917 | 42524429 | - | evm.TU.LG04.2125 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.95 | 10,876.98 Da | 50.06 | 62.63 | -0.93 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16116 | Ubl_Smt3_like | 18 | 90 | 5.23289E-47 | - |
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 19 | 89 | 2.6E-25 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 9 | 94 | 6.26E-28 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 2 | 94 | 7.6E-40 | - |
| SMART | SM00213 | ubq_7 | 19 | 90 | 9.2E-13 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 17 | 94 | 15.601284 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55160.1 | small ubiquitin-like modifier 2. Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. SUMO2 can form SUMO chains through lysine residue 10 during in vitro assays. | 0 |
| RefSeq | XP_028768769.1 | small ubiquitin-related modifier 2-like [Prosopis alba] | 0 |
| Q9FLP6 | Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0MP85 | Small ubiquitin-related modifier OS=Rhamnella rubrinervis OX=2594499 GN=FNV43_RR03837 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology