Basic Information
Locus ID:
evm.TU.LG04.2106
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG04 | 42285182 | 42293350 | - | evm.TU.LG04.2106 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.85 | 86,805.04 Da | 46.08 | 89.77 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 491 | 752 | 2.34451E-85 | - |
| Pfam | PF01476 | LysM domain | 296 | 340 | 0.0074 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 487 | 754 | 6.5E-47 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 464 | 755 | 3.78E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 465 | 555 | 4.1E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 556 | 775 | 1.8E-56 | - |
| SMART | SM00257 | LysM_2 | 169 | 217 | 6.8 | IPR018392 |
| SMART | SM00257 | LysM_2 | 104 | 150 | 0.64 | IPR018392 |
| SMART | SM00220 | serkin_6 | 485 | 757 | 8.6E-42 | IPR000719 |
| SMART | SM00257 | LysM_2 | 295 | 341 | 0.31 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 485 | 758 | 39.792168 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 491 | 513 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 600 | 612 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_043611569.1 | chitin elicitor receptor kinase 1-like [Erigeron canadensis] | 0 |
| Q6UD73 | LysM domain receptor-like kinase 3 OS=Medicago truncatula OX=3880 GN=LYK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6R9T8 | Protein kinase domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_014335 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology