Basic Information
Locus ID:
evm.TU.LG04.1937
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
F-box LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG04 | 39941654 | 39946306 | + | evm.TU.LG04.1937 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.91 | 57,117.81 Da | 35.77 | 99.05 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 12 | 48 | 2.6E-5 | IPR001810 |
| SUPERFAMILY | SSF52058 | L domain-like | 120 | 304 | 2.96E-11 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 8 | 62 | 1.31E-10 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 7 | 323 | 1.6E-12 | IPR032675 |
| SMART | SM00256 | fbox_2 | 15 | 54 | 9.3E-4 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 9 | 61 | 10.477762 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22700.6 | - | 0 |
| RefSeq | XP_011048532.1 | PREDICTED: putative FBD-associated F-box protein At5g53635 [Populus euphratica] | 0 |
| Q9FNJ1 | F-box/FBD/LRR-repeat protein At5g22700 OS=Arabidopsis thaliana OX=3702 GN=At5g22700 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8X8CDK8 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_045852 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology