halophFGD

Basic Information

Locus ID: evm.TU.LG04.1902

Species & Taxonomic ID: Portulaca oleracea & 46147

Genome Assembly: GWHCBIU00000000

Description: Endochitinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr4	35844988	35852402	-	evm.TU.LG04.1902

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.62	54,097.62 Da	81.83	49.37	-0.61

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00035	ChtBD1	232	251	3.69863E-8	-
CDD	cd00325	chitinase_GH19	275	504	8.56767E-108	-
Pfam	PF00182	Chitinase class I	274	504	2.5E-126	IPR000726
SUPERFAMILY	SSF57016	Plant lectins/antimicrobial peptides	231	259	2.36E-7	IPR036861
SUPERFAMILY	SSF53955	Lysozyme-like	270	510	1.91E-101	IPR023346
Gene3D	G3DSA:1.10.530.10	-	279	510	9.8E-116	-
Gene3D	G3DSA:3.30.20.10	Endochitinase, domain 2	357	413	9.8E-116	-
Gene3D	G3DSA:3.30.60.10	-	230	253	2.1E-6	IPR036861
ProSitePatterns	PS00773	Chitinases family 19 signature 1.	292	314	-	IPR000726
ProSitePatterns	PS00774	Chitinases family 19 signature 2.	417	427	-	IPR000726
PRINTS	PR01217	Proline rich extensin signature	25	37	1.4E-10	-
PRINTS	PR01217	Proline rich extensin signature	92	113	1.4E-10	-
PRINTS	PR01217	Proline rich extensin signature	43	59	1.4E-10	-
PRINTS	PR01217	Proline rich extensin signature	80	92	1.4E-10	-
MobiDBLite	mobidb-lite	consensus disorder prediction	177	225	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	82	123	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	51	81	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	151	165	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	28	50	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	19	225	-	-

Gene Ontology

Biological Process:

GO:0006032 (chitin catabolic process) GO:0016998 (cell wall macromolecule catabolic process)

Molecular Function:

GO:0004568 (chitinase activity) GO:0008061 (chitin binding)

KEGG Pathway

KO Term:

K01183 (chitinase [EC:3.2.1.14])

Pathway:

ko00520 (Amino sugar and nucleotide sugar metabolism) map00520 (Amino sugar and nucleotide sugar metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways)

Reaction:

R01206 (Chitin + H2O <=> N-Acetyl-D-glucosamine + Chitin) R02334 (Chitin + H2O <=> Chitobiose + Chitin)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G12500.1	basic chitinase. encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses.
RefSeq	XP_021740345.1	basic endochitinase-like [Chenopodium quinoa]
Swiss-Prot	P93680	Endochitinase OS=Persea americana OX=3435 GN=chi1 PE=1 SV=2
TrEMBL	A0A803MEI4	Chitin-binding type-1 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Aizoaceae	Mesembryanthemum crystallinum	8	gene_15645, gene_15646, gene_17621, gene_2705, gene_2707 ... gene_2708, gene_2711, gene_2713
Amaranthaceae	Atriplex hortensis	4	Ah019453, Ah019459, Ah019466, Ah023701
Amaranthaceae	Beta vulgaris	4	BVRB_1g007720, BVRB_3g057620, BVRB_3g057660, BVRB_3g057670
Amaranthaceae	Salicornia bigelovii	3	Sbi_jg38229, Sbi_jg6362, Sbi_jg6363
Amaranthaceae	Salicornia europaea	1	Seu_jg15490
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00001031, GOSA_00006345
Amaranthaceae	Suaeda glauca	3	Sgl10582, Sgl15822, Sgl15833
Amaranthaceae	Chenopodium album	9	gene:ENSEOMG00000010858, gene:ENSEOMG00000015497 ... gene:ENSEOMG00000031266, gene:ENSEOMG00000031819, gene:ENSEOMG00000035924, gene:ENSEOMG00000043688, gene:ENSEOMG00000046275, gene:ENSEOMG00000046909, gene:ENSEOMG00000050355
Amaranthaceae	Chenopodium quinoa	6	CQ.Regalona.r1.1AG0010570, CQ.Regalona.r1.1BG0015280 ... CQ.Regalona.r1.1BG0015290, CQ.Regalona.r1.3AG0010210, CQ.Regalona.r1.3BG0010360, CQ.Regalona.r1.3BG0010370
Anacardiaceae	Pistacia vera	9	pistato.v30007230, pistato.v30106180, pistato.v30109140 ... pistato.v30210750, pistato.v30210760, pistato.v30211920, pistato.v30211930, pistato.v30292310, pistato.v30293550
Apiaceae	Apium graveolens	5	Ag10G01110, Ag10G01112, Ag11G04446, Ag2G01854, Ag9G02370
Arecaceae	Cocos nucifera	3	COCNU_01G022440, COCNU_07G014740, scaffold006850G000050
Arecaceae	Phoenix dactylifera	5	gene-LOC103714742, gene-LOC103723070, gene-LOC103723078 ... gene-LOC120104412, gene-LOC120108798
Asparagaceae	Asparagus officinalis	1	AsparagusV1_07.1170.V1.1
Asteraceae	Flaveria trinervia	1	Ftri18G13318
Brassicaceae	Arabidopsis thaliana	3	AT1G02360.1, AT3G12500.1, AT4G01700.1
Brassicaceae	Eutrema salsugineum	3	Thhalv10008465m.g.v1.0, Thhalv10021149m.g.v1.0 ... Thhalv10028870m.g.v1.0
Brassicaceae	Schrenkiella parvula	2	Sp3g10630.v2.2, Sp6g01590.v2.2
Brassicaceae	Brassica nigra	10	BniB01g052510.2N, BniB01g052550.2N, BniB03g037820.2N ... BniB07g025940.2N, BniB07g025960.2N, BniB07g026080.2N, BniB07g026090.2N, BniB07g056330.2N, BniB08g033280.2N, BniB08g044110.2N
Casuarinaceae	Casuarina equisetifolia	7	Ceq06G0552, Ceq07G1841, Ceq07G1845, Ceq09G0406, Ceq09G0408 ... Ceq09G0409, Ceq09G0410
Casuarinaceae	Casuarina glauca	10	Cgl01G1254, Cgl06G0572, Cgl07G2004, Cgl07G2017, Cgl07G2019 ... Cgl07G2021, Cgl09G0441, Cgl09G0443, Cgl09G0444, Cgl09G0445
Cymodoceaceae	Cymodocea nodosa	4	gene.Cymno03g04490, gene.Cymno03g04500, gene.Cymno03g04510 ... gene.Cymno04g03510
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate01g31330, gene.Thate06g23960
Nitrariaceae	Nitraria sibirica	11	evm.TU.LG02.2849, evm.TU.LG02.2850, evm.TU.LG02.2851 ... evm.TU.LG04.552, evm.TU.LG08.384, evm.TU.LG08.386, evm.TU.LG08.387, evm.TU.LG08.388, evm.TU.LG08.389, evm.TU.LG08.391, evm.TU.LG08.657
Plantaginaceae	Plantago ovata	1	Pov_00016542
Plumbaginaceae	Limonium bicolor	4	Lb2G08583, Lb2G08585, Lb6G31372, Lb6G31380
Poaceae	Echinochloa crus-galli	25	AH01.3043, AH01.5204, AH02.1339, AH05.811, AH05.812 ... AH05.815, AH06.3027, AH06.3028, BH01.5004, BH01.5006, BH02.1387, BH04.471, BH05.2637, BH06.2812, CH01.3627, CH01.3628, CH01.5605, CH01.5606, CH02.1499, CH04.465, CH05.1108, CH05.2740, Contig181.197, Contig181.198, Contig181.200
Poaceae	Eleusine coracana subsp. coracana	16	gene-QOZ80_1AG0013510, gene-QOZ80_1BG0062250 ... gene-QOZ80_2AG0115360, gene-QOZ80_2AG0115370, gene-QOZ80_2BG0169150, gene-QOZ80_2BG0169160, gene-QOZ80_3AG0232650, gene-QOZ80_5AG0373910, gene-QOZ80_5AG0373920, gene-QOZ80_5AG0374010, gene-QOZ80_5BG0422250, gene-QOZ80_5BG0422300, gene-QOZ80_5BG0422350, gene-QOZ80_5BG0453810, gene-QOZ80_6AG0551310, gene-QOZ80_6BG0504890
Poaceae	Hordeum vulgare	11	HORVU.MOREX.r3.1HG0018250.1, HORVU.MOREX.r3.1HG0054950.3 ... HORVU.MOREX.r3.1HG0063630.1.CDS1, HORVU.MOREX.r3.1HG0090110.1.CDS1, HORVU.MOREX.r3.2HG0217120.1.CDS1, HORVU.MOREX.r3.3HG0244120.1, HORVU.MOREX.r3.3HG0281620.1.CDS1, HORVU.MOREX.r3.5HG0513420.1.CDS1, HORVU.MOREX.r3.7HG0742440.1, HORVU.MOREX.r3.7HG0751740.1.CDS1, HORVU.MOREX.r3.7HG0751750.1.CDS1
Poaceae	Lolium multiflorum	11	gene-QYE76_004819, gene-QYE76_009389, gene-QYE76_012337 ... gene-QYE76_012375, gene-QYE76_012437, gene-QYE76_012442, gene-QYE76_013393, gene-QYE76_013394, gene-QYE76_022431, gene-QYE76_052627, gene-QYE76_054697
Poaceae	Oryza coarctata	8	Oco02G008630, Oco05G016060, Oco06G002010, Oco09G009390 ... Oco09G009400, Oco10G001890, Oco12G017810, Oco20G009100
Poaceae	Oryza sativa	11	LOC_Os01g18400.1, LOC_Os03g04060.1, LOC_Os03g30470.1 ... LOC_Os05g04690.1, LOC_Os05g33130.1, LOC_Os05g33140.1, LOC_Os05g33150.1, LOC_Os06g51050.1, LOC_Os06g51060.1, LOC_Os10g39680.1, LOC_Os10g39700.1
Poaceae	Paspalum vaginatum	10	gene-BS78_01G298100, gene-BS78_01G298200, gene-BS78_K261500 ... gene-BS78_01G491900, gene-BS78_03G126600, gene-BS78_08G163400, gene-BS78_09G036900, gene-BS78_09G246200, gene-BS78_10G262100, gene-BS78_10G262300
Poaceae	Puccinellia tenuiflora	5	Pt_Chr0106627, Pt_Chr0500477, Pt_Chr0503085, Pt_Chr0505170 ... Pt_Chr0600512
Poaceae	Sporobolus alterniflorus	14	Chr03G006660, Chr04G005200, Chr06G028490, Chr07G006360 ... Chr08G007110, Chr09G004040, Chr09G004050, Chr13G020930, Chr13G020940, Chr15G019730, Chr18G001450, Chr18G008620, Chr22G008620, Chr22G008970
Poaceae	Thinopyrum elongatum	20	Tel1E01G163100, Tel1E01G350800, Tel1E01G351000 ... Tel1E01G415500, Tel2E01G091000, Tel2E01G1042200, Tel2E01G1043400, Tel2E01G1043700, Tel2E01G1044700, Tel2E01G1044900, Tel2E01G1045200, Tel2E01G266500, Tel3E01G239900, Tel3E01G434000, Tel5E01G632200, Tel6E01G041400, Tel7E01G954500, Tel7E01G954600, Tel7E01G954700, Tel7E01G954800
Poaceae	Triticum dicoccoides	25	gene_TRIDC1AG011680, gene_TRIDC1AG030790 ... gene_TRIDC1AG037510, gene_TRIDC1BG014450, gene_TRIDC1BG036270, gene_TRIDC1BG042570, gene_TRIDC1BG042590, gene_TRIDC1BG042630, gene_TRIDC2AG003580, gene_TRIDC2AG081890, gene_TRIDC2AG081950, gene_TRIDC2AG082070, gene_TRIDC2BG004140, gene_TRIDC2BG091110, gene_TRIDC3AG017040, gene_TRIDC3AG038900, gene_TRIDC3BG022650, gene_TRIDC3BG044040, gene_TRIDC5AG058940, gene_TRIDC5AG058950, gene_TRIDC5BG062110, gene_TRIDC5BG063090, gene_TRIDC7AG076270, gene_TRIDC7AG076680, gene_TRIDC7BG073080
Poaceae	Triticum aestivum	46	TraesCS1A02G082400.1, TraesCS1A02G203600.1 ... TraesCS1A02G203700.1, TraesCS1A02G250000.1.cds1, TraesCS1B02G100000.1, TraesCS1B02G260600.1.cds1, TraesCS1B02G260700.1.cds1, TraesCS1D02G207000.1, TraesCS1D02G207100.3, TraesCS1D02G249600.1.cds1, TraesCS2A02G033600.1, TraesCS2A02G558200.1, TraesCS2B02G047300.1, TraesCS2B02G622200.1.cds1, TraesCS2D02G033100.1, TraesCS2D02G571400.1.cds1, TraesCS3A02G260100.1.cds1, TraesCS3A02G260200.1.cds1, TraesCS3A02G312500.1, TraesCS3B02G159700.1, TraesCS3B02G293200.1.cds1, TraesCS3D02G141900.1, TraesCS3D02G260300.1.cds1, TraesCS3D02G260500.1.cds1, TraesCS5A02G405500.1.cds1, TraesCS5A02G405600.1.cds1, TraesCS5B02G403700.1, TraesCS5B02G410300.1.cds1, TraesCS5D02G408200.1, TraesCS5D02G415600.1.cds1, TraesCS7A02G548000.1.cds1, TraesCS7A02G548100.1.cds1, TraesCS7A02G548200.1.cds1, TraesCS7A02G552100.1.cds1, TraesCS7B02G370700.1, TraesCS7B02G471300.1.cds1, TraesCS7B02G471400.1.cds1, TraesCS7B02G471500.1.cds1, TraesCS7B02G471900.1.cds1, TraesCS7B02G493700.1, TraesCS7D02G534700.1.cds1, TraesCS7D02G534800.1.cds1, TraesCS7D02G534900.1.cds1, TraesCS7D02G535000.1, TraesCSU02G020700.1, TraesCSU02G169600.1.cds1
Poaceae	Zea mays	11	Zm00001eb002620_P002, Zm00001eb022500_P001 ... Zm00001eb228500_P001, Zm00001eb228510_P001, Zm00001eb270440_P001, Zm00001eb270450_P001, Zm00001eb272050_P001, Zm00001eb272090_P001, Zm00001eb332350_P001, Zm00001eb346860_P001, Zm00001eb354540_P001
Poaceae	Zoysia japonica	6	nbis-gene-14503, nbis-gene-40816, nbis-gene-47031 ... nbis-gene-47032, nbis-gene-50128, nbis-gene-6638
Poaceae	Zoysia macrostachya	6	Zma_g10160, Zma_g15617, Zma_g15618, Zma_g26391, Zma_g26821 ... Zma_g33440
Portulacaceae	Portulaca oleracea	16	evm.TU.LG04.1896, evm.TU.LG04.1897, evm.TU.LG04.1898 ... evm.TU.LG04.1899, evm.TU.LG04.1901, evm.TU.LG04.1902, evm.TU.LG06.1636, evm.TU.LG06.440, evm.TU.LG06.442, evm.TU.LG06.446, evm.TU.LG06.447, evm.TU.LG06.448, evm.TU.LG06.449, evm.TU.LG06.453, evm.TU.LG11.992, evm.TU.LG11.993
Posidoniaceae	Posidonia oceanica	6	gene.Posoc01g09090, gene.Posoc02g11190, gene.Posoc02g11200 ... gene.Posoc02g11210, gene.Posoc07g06270, gene.Posoc07g06290
Rhizophoraceae	Bruguiera sexangula	5	evm.TU.Scaffold_2_RagTag.42, evm.TU.Scaffold_5_RagTag.725 ... evm.TU.Scaffold_6_RagTag.2170, evm.TU.Scaffold_6_RagTag.2171, evm.TU.Scaffold_9_RagTag.689
Rhizophoraceae	Carallia pectinifolia	6	nbisL1-mrna-10620, nbisL1-mrna-16963, nbisL1-mrna-32 ... nbisL1-mrna-34, nbisL1-mrna-38, nbisL1-mrna-40
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-107, nbisL1-mrna-13392, nbisL1-mrna-18423 ... nbisL1-mrna-6214
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-11365, nbisL1-mrna-11662, nbisL1-mrna-7485
Rhizophoraceae	Kandelia candel	4	add.evm.TU.utg000011l.552, evm.TU.utg000003l.150 ... evm.TU.utg000006l.612, evm.TU.utg000009l.1214
Rhizophoraceae	Kandelia obovata	3	Maker00005209, Maker00005953, Maker00007266
Rhizophoraceae	Rhizophora apiculata	5	nbisL1-mrna-10167, nbisL1-mrna-14089, nbisL1-mrna-14090 ... nbisL1-mrna-15710, nbisL1-mrna-1647
Rhizophoraceae	Rhizophora mangle	5	nbisL1-mrna-24128, nbisL1-mrna-24129, nbisL1-mrna-2944 ... nbisL1-mrna-5351, nbisL1-mrna-7360
Salicaceae	Populus euphratica	9	populus_peu08627, populus_peu08628, populus_peu08630 ... populus_peu08631, populus_peu27435, populus_peu31419, populus_peu36714, populus_peu36715, populus_peu36717
Solanaceae	Lycium barbarum	10	gene-LOC132606673, gene-LOC132606674, gene-LOC132607839 ... gene-LOC132608118, gene-LOC132611120, gene-LOC132621322, gene-LOC132622236, gene-LOC132632390, gene-LOC132632958, gene-LOC132632961
Solanaceae	Solanum chilense	7	SOLCI000128600, SOLCI000128700, SOLCI000308600 ... SOLCI002160200, SOLCI002643800, SOLCI004629700, SOLCI005567900
Solanaceae	Solanum pennellii	7	gene-LOC107001553, gene-LOC107001702, gene-LOC107002339 ... gene-LOC107002341, gene-LOC107008831, gene-LOC107010447, gene-LOC107011490
Tamaricaceae	Reaumuria soongarica	1	gene_8680
Zosteraceae	Zostera marina	2	Zosma02g11610.v3.1, Zosma03g12150.v3.1