Basic Information
Locus ID:
evm.TU.LG04.1896
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Endochitinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 35775724 | 35778291 | - | evm.TU.LG04.1896 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.84 | 33,901.47 Da | 33.76 | 62.61 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00035 | ChtBD1 | 25 | 64 | 4.90706E-14 | - |
| CDD | cd00325 | chitinase_GH19 | 77 | 307 | 2.04535E-109 | - |
| Pfam | PF00182 | Chitinase class I | 76 | 307 | 1.4E-122 | IPR000726 |
| Pfam | PF00187 | Chitin recognition protein | 25 | 63 | 1.8E-11 | IPR001002 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 25 | 66 | 1.44E-11 | IPR036861 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 73 | 313 | 5.62E-103 | IPR023346 |
| Gene3D | G3DSA:3.30.60.10 | - | 23 | 79 | 4.3E-15 | IPR036861 |
| Gene3D | G3DSA:1.10.530.10 | - | 81 | 313 | 5.3E-116 | - |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 159 | 215 | 5.3E-116 | - |
| SMART | SM00270 | ChitinBD_3 | 25 | 63 | 1.3E-14 | IPR001002 |
| PIRSF | PIRSF001060 | Endochitinase | 1 | 314 | 1.3E-124 | IPR016283 |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 23 | 65 | 10.602406 | IPR001002 |
| ProSitePatterns | PS00026 | Chitin recognition or binding domain signature. | 35 | 54 | - | IPR018371 |
| ProSitePatterns | PS00774 | Chitinases family 19 signature 2. | 219 | 229 | - | IPR000726 |
| PRINTS | PR00451 | Chitin-binding domain signature | 33 | 41 | 6.1E-6 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 41 | 48 | 6.1E-6 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 48 | 55 | 6.1E-6 | IPR001002 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12500.1 | basic chitinase. encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. | 0 |
| RefSeq | XP_021740345.1 | basic endochitinase-like [Chenopodium quinoa] | 0 |
| P11955 | 26 kDa endochitinase 1 OS=Hordeum vulgare OX=4513 PE=2 SV=4 | 0 | |
| TrEMBL | A0A803MEI4 | Chitin-binding type-1 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology