Basic Information
Locus ID:
evm.TU.LG04.1721
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
(NAC) domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 32431919 | 32435116 | + | evm.TU.LG04.1721 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 43,002.62 Da | 45.13 | 69.20 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 56 | 196 | 2.6E-20 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 40 | 215 | 5.1E-37 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 64 | 220 | 1.3E-28 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 55 | 215 | 30.435226 | IPR003441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01600.1 | NAC domain containing protein 44. | 0 |
| RefSeq | XP_010686990.1 | SUPPRESSOR OF GAMMA RESPONSE 1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QMT0 | NAC domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_161730 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology