Basic Information
Locus ID:
evm.TU.LG04.172
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG04 | 1777323 | 1780370 | + | evm.TU.LG04.172 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.08 | 73,225.18 Da | 35.40 | 95.03 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12087 | TM_EGFR-like | 303 | 332 | 6.5828E-4 | - |
| CDD | cd14066 | STKc_IRAK | 408 | 667 | 7.60078E-91 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 405 | 664 | 1.2E-37 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 211 | 232 | 0.64 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 137 | 197 | 1.8E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 62 | 1.1E-7 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 384 | 665 | 9.24E-55 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 20 | 233 | 1.02E-42 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 20 | 176 | 2.5E-46 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 177 | 246 | 3.0E-16 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 376 | 480 | 5.3E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 481 | 669 | 7.5E-43 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 402 | 668 | 29.290607 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45340.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_031269597.1 | probable LRR receptor-like serine/threonine-protein kinase At4g36180 isoform X1 [Pistacia vera] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2H5NP76 | Protein kinase domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_063420 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology