Basic Information
Locus ID:
evm.TU.LG04.170
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Nascent polypeptide-associated complex subunit alpha-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 3575440 | 3594845 | + | evm.TU.LG04.170 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.48 | 25,224.67 Da | 60.03 | 74.35 | -0.89 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:1.10.8.10 | - | 84 | 118 | 5.1E-7 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 164 | 203 | 3.4E-12 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 127 | 165 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 136 | 163 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
| Coils | Coil | Coil | 132 | 162 | - | - |
| Coils | Coil | Coil | 90 | 110 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G49470.1 | nascent polypeptide-associated complex subunit alpha-like protein 2. | 0 |
| RefSeq | XP_003055470.1 | predicted protein [Micromonas pusilla CCMP1545] | 0 |
| Q9M612 | Nascent polypeptide-associated complex subunit alpha-like protein OS=Pinus taeda OX=3352 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG01.603, evm.TU.LG01.604, evm.TU.LG04.168 ... |