Basic Information
Locus ID:
evm.TU.LG04.1122
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Homocysteine s-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG04 | 14199125 | 14203998 | - | evm.TU.LG04.1122 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.97 | 37,854.43 Da | 37.33 | 90.32 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 30 | 337 | 2.5E-77 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 25 | 342 | 1.57E-84 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 19 | 337 | 3.3E-103 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 294 | 346 | 0.11 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 17 | 192 | 1.6E-5 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 17 | 339 | 47.891796 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63250.1 | homocysteine methyltransferase 2. Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. | 0 |
| RefSeq | XP_024043501.1 | selenocysteine methyltransferase [Citrus clementina] | 0 |
| P56707 | Selenocysteine methyltransferase OS=Astragalus bisulcatus OX=20406 GN=SMTA PE=1 SV=1 | 0 | |
| TrEMBL | V4VVG5 | Hcy-binding domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10020605mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology