Basic Information
Locus ID:
evm.TU.LG03.773
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG03 | 8114604 | 8116389 | - | evm.TU.LG03.773 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.94 | 45,176.67 Da | 53.42 | 71.67 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01753 | MYND finger | 341 | 380 | 6.6E-8 | IPR002893 |
| SUPERFAMILY | SSF81901 | HCP-like | 113 | 235 | 7.98E-13 | - |
| SUPERFAMILY | SSF144232 | HIT/MYND zinc finger-like | 334 | 385 | 1.92E-10 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 47 | 111 | 1.03E-6 | IPR036047 |
| Gene3D | G3DSA:6.10.140.2220 | - | 332 | 385 | 1.4E-10 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 93 | 255 | 4.3E-18 | IPR011990 |
| ProSiteProfiles | PS50865 | Zinc finger MYND-type profile. | 338 | 380 | 10.937226 | IPR002893 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 387 | 413 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67340.1 | HCP-like superfamily protein with MYND-type zinc finger. | 0 |
| RefSeq | XP_024957254.1 | F-box protein At1g67340 [Citrus sinensis] | 0 |
| Q9FYF9 | F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067GQ94 | MYND-type domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g015393mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology