Basic Information
Locus ID:
evm.TU.LG03.760
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Leucine-rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 8767886 | 8769115 | + | evm.TU.LG03.760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.37 | 45,127.60 Da | 44.18 | 95.04 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 43 | 81 | 8.1E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 139 | 198 | 1.8E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 280 | 384 | 7.25E-9 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 42 | 293 | 4.59E-40 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 43 | 207 | 4.7E-34 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 208 | 385 | 5.2E-28 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_027071567.1 | LRR receptor-like serine/threonine-protein kinase ERECTA [Coffea arabica] | 0 |
| TrEMBL | A0A127AUF3 | LRR-RLK OS=Vernicia fordii OX=73154 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology