Basic Information
Locus ID:
evm.TU.LG03.547
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Homocysteine s-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG03 | 5677996 | 5680082 | + | evm.TU.LG03.547 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 35,329.12 Da | 30.49 | 96.37 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 23 | 323 | 4.4E-72 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 18 | 325 | 1.83E-77 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 8 | 322 | 2.8E-96 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 1 | 247 | 8.8E-9 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 285 | 325 | 7.6 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 10 | 324 | 47.100353 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25900.1 | Homocysteine S-methyltransferase family protein. | 0 |
| RefSeq | XP_002282549.1 | PREDICTED: homocysteine S-methyltransferase 1 [Vitis vinifera] | 0 |
| A4ZGQ8 | Homocysteine S-methyltransferase 1 OS=Brassica oleracea var. italica OX=36774 GN=HMT1 PE=1 SV=1 | 0 | |
| TrEMBL | D7T951 | Hcy-binding domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_01s0011g03500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology