Basic Information
Locus ID:
evm.TU.LG03.280
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 3011415 | 3019341 | - | evm.TU.LG03.280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.17 | 20,995.55 Da | 71.26 | 72.57 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 38 | 176 | 1.7192E-75 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 39 | 175 | 1.6E-52 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 25 | 181 | 3.28E-64 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 30 | 179 | 8.3E-68 | IPR016135 |
| SMART | SM00212 | ubc_7 | 38 | 181 | 5.4E-69 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 35 | 181 | 60.566891 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 108 | 123 | - | IPR023313 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02760.1 | ubiquiting-conjugating enzyme 2. ubiquitin conjugating enzyme UBC2. Homolog of the yeast RAD6 gene. | 0 |
| RefSeq | XP_049384878.1 | ubiquitin-conjugating enzyme E2 2-like [Solanum stenotomum] | 0 |
| P42745 | Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana OX=3702 GN=UBC2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A314YV04 | UBC core domain-containing protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_14578 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology