Basic Information
Locus ID:
evm.TU.LG03.2256
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG03 | 45170375 | 45174486 | - | evm.TU.LG03.2256 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 28,412.85 Da | 42.63 | 66.14 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 6 | 258 | 6.7E-87 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 142 | 248 | 8.53E-23 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 144 | 261 | 3.8E-44 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 149 | 249 | 24.955482 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 111 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 0 |
| RefSeq | XP_021283327.1 | auxin-responsive protein IAA16 [Herrania umbratica] | 0 |
| O24407 | Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J1A861 | Auxin-responsive protein OS=Herrania umbratica OX=108875 GN=LOC110415888 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology