HalophFGD

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Basic Information
Locus ID: evm.TU.LG03.2251
Species & Taxonomic ID: Portulaca oleracea & 46147
Genome Assembly: GWHCBIU00000000
Short Name: ORC3
Description: Origin Recognition Complex subunit
Maps and Mapping Data
Chromosome Start End Strand ID
chr3 54094964 54099359 + evm.TU.LG03.2251
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.95 19,322.22 Da 75.05 98.63 -0.03
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
KEGG Pathway
KO Term:
K02605 (origin recognition complex subunit 3)
Pathway:
ko04110 (Cell cycle) map04110 (Cell cycle) ko04111 (Cell cycle - yeast) map04111 (Cell cycle - yeast) ko04113 (Meiosis - yeast) map04113 (Meiosis - yeast)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G16690.2 - 0
RefSeq XP_021282230.1 origin of replication complex subunit 3 isoform X3 [Herrania umbratica] 0
Swiss-Prot Q6E7H0 Origin of replication complex subunit 3 OS=Arabidopsis thaliana OX=3702 GN=ORC3 PE=1 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 2 jg16644, jg16645
Aizoaceae Mesembryanthemum crystallinum 2 gene_20887, gene_20888
Amaranthaceae Suaeda glauca 4 Sgl78662, Sgl78677, Sgl81141, Sgl81153
Amaranthaceae Chenopodium album 3 gene:ENSEOMG00000015962, gene:ENSEOMG00000039759 ...
gene:ENSEOMG00000052642
Amaranthaceae Chenopodium quinoa 2 CQ.Regalona.r1.9AG0005260, CQ.Regalona.r1.9BG0017040
Anacardiaceae Pistacia vera 1 pistato.v30059140
Apiaceae Apium graveolens 3 Ag11G04273, Ag11G04274, Ag11G04275
Arecaceae Cocos nucifera 1 COCNU_04G002940
Arecaceae Phoenix dactylifera 1 gene-LOC103702868
Asparagaceae Asparagus officinalis 1 AsparagusV1_07.383.V1.1
Asteraceae Flaveria trinervia 4 Ftri16G11156, Ftri16G28335, Ftri16G33256, Ftri2G26274
Brassicaceae Arabidopsis thaliana 21 AT2G19610.2, AT2G21420.1, AT2G22940.1, AT2G25360.1 ...
AT2G25370.1, AT2G26130.1, AT2G26135.1, AT3G43180.1, AT3G43750.1, AT3G45460.1, AT3G45470.1, AT3G45480.1, AT3G45510.1, AT3G45540.1, AT3G45555.1, AT3G45560.1, AT3G45570.1, AT3G45580.1, AT5G07640.1, AT5G37560.1, AT5G60250.1
Brassicaceae Eutrema salsugineum 7 Thhalv10000449m.g.v1.0, Thhalv10002469m.g.v1.0 ...
Thhalv10002765m.g.v1.0, Thhalv10003078m.g.v1.0, Thhalv10012895m.g.v1.0, Thhalv10015687m.g.v1.0, Thhalv10029419m.g.v1.0
Brassicaceae Schrenkiella parvula 6 Sp4g04530.v2.2, Sp4g04580.v2.2, Sp4g06090.v2.2 ...
Sp5g15910.v2.2, Sp6g04210.v2.2, Sp6g21870.v2.2
Brassicaceae Brassica nigra 16 BniB01g017220.2N, BniB01g017230.2N, BniB01g040740.2N ...
BniB02g023760.2N, BniB02g039920.2N, BniB02g039980.2N, BniB02g044910.2N, BniB04g009590.2N, BniB04g030740.2N, BniB05g036860.2N, BniB05g056010.2N, BniB08g011890.2N, BniB08g011950.2N, BniB08g018270.2N, BniB08g043200.2N, BniB08g058410.2N
Casuarinaceae Casuarina equisetifolia 4 Ceq08G2422, Ceq08G2423, Ceq08G2424, Ceq08G2425
Casuarinaceae Casuarina glauca 4 Cgl04G2503, Cgl08G2641, Cgl08G2642, Cgl08G2661
Hydrocharitaceae Thalassia testudinum 2 gene.Thate01g01670, gene.Thate01g01690
Nitrariaceae Nitraria sibirica 2 evm.TU.LG09.961, evm.TU.LG09.962
Plantaginaceae Plantago ovata 4 Pov_00006793, Pov_00014691, Pov_00033936, Pov_00033939
Plumbaginaceae Limonium bicolor 2 Lb6G31815, Lb6G31819
Poaceae Echinochloa crus-galli 5 AH02.994, AH06.339, BH02.1133, BH06.445, CH02.1168
Poaceae Eleusine coracana subsp. coracana 5 gene-QOZ80_5AG0378410, gene-QOZ80_5AG0378420 ...
gene-QOZ80_5BG0425480, gene-QOZ80_5BG0425500, gene-QOZ80_9BG0695380
Poaceae Hordeum vulgare 3 HORVU.MOREX.r3.5HG0466340.1, HORVU.MOREX.r3.5HG0466420.1 ...
HORVU.MOREX.r3.7HG0663970.1
Poaceae Lolium multiflorum 4 gene-QYE76_003804, gene-QYE76_003806, gene-QYE76_003807 ...
gene-QYE76_028652
Poaceae Oryza coarctata 4 Ocoptg000043lG000030, Ocoptg000074lG000040 ...
Ocoptg000081lG000040, Ocoptg000092lG000040
Poaceae Oryza sativa 3 LOC_Os03g44720.1, LOC_Os11g01240.1, LOC_Os12g01230.1
Poaceae Paspalum vaginatum 2 gene-BS78_08G000300, gene-BS78_10G051600
Poaceae Puccinellia tenuiflora 2 Pt_Chr0705190, Pt_Chr0705191
Poaceae Sporobolus alterniflorus 8 Chr04G023150, Chr04G023160, Chr06G024900, Chr06G024920 ...
Chr19G011180, Chr19G011190, Chr19G011200, Chr27G004920
Poaceae Thinopyrum elongatum 3 Tel5E01G268400, Tel5E01G268500, Tel7E01G317000
Poaceae Triticum dicoccoides 2 gene_TRIDC5AG025830, gene_TRIDC5BG026960
Poaceae Triticum aestivum 7 TraesCS5A02G155400.1, TraesCS5A02G155500.1 ...
TraesCS5B02G153700.1, TraesCS5B02G153800.1, TraesCS5D02G160500.1, TraesCS5D02G160600.1, TraesCS7D02G174000.1
Poaceae Zea mays 1 Zm00001eb194870_P002
Poaceae Zoysia japonica 2 nbis-gene-25859, nbis-gene-46275
Poaceae Zoysia macrostachya 2 Zma_g24580, Zma_g25551
Portulacaceae Portulaca oleracea 7 evm.TU.LG02.2352, evm.TU.LG02.2353, evm.TU.LG03.2251 ...
evm.TU.LG03.2252, evm.TU.LG17.1297, evm.TU.LG23.584, evm.TU.LG23.585
Posidoniaceae Posidonia oceanica 1 gene.Posoc02g02890
Rhizophoraceae Bruguiera sexangula 3 evm.TU.Scaffold_12_RagTag.331, evm.TU.Scaffold_12_RagTag.332 ...
evm.TU.Scaffold_13_RagTag.745
Rhizophoraceae Carallia pectinifolia 2 nbisL1-mrna-24464, nbisL1-mrna-30305
Rhizophoraceae Ceriops tagal 2 nbisL1-mrna-19735, nbisL1-mrna-9410
Rhizophoraceae Ceriops zippeliana 2 nbisL1-mrna-16120, nbisL1-mrna-19607
Rhizophoraceae Kandelia candel 2 evm.TU.utg000015l.432, evm.TU.utg000027l.371
Rhizophoraceae Kandelia obovata 2 Maker00015287, Maker00017822
Rhizophoraceae Rhizophora apiculata 2 nbisL1-mrna-4352, nbisL1-mrna-5613
Rhizophoraceae Rhizophora mangle 2 nbisL1-mrna-11829, nbisL1-mrna-15059
Salicaceae Populus euphratica 2 populus_peu11475, populus_peu36784
Solanaceae Lycium barbarum 4 gene-LOC132600799, gene-LOC132605940, gene-LOC132605944 ...
gene-LOC132619016
Solanaceae Solanum chilense 1 SOLCI001155000
Solanaceae Solanum pennellii 1 gene-LOC107021552
Tamaricaceae Reaumuria soongarica 2 STRG.4780_chr04_-, gene_101
Tamaricaceae Tamarix chinensis 1 TC03G0004
Zosteraceae Zostera marina 1 Zosma06g21390.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.