Basic Information
Locus ID:
evm.TU.LG03.2234
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Lysosomal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 53801845 | 53822946 | + | evm.TU.LG03.2234 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 112,277.53 Da | 30.15 | 88.05 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 39 | 314 | 0.0 | - |
| Pfam | PF09261 | Alpha mannosidase middle domain | 356 | 448 | 4.4E-19 | IPR015341 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 894 | 1001 | 2.3E-10 | IPR041147 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 598 | 812 | 3.2E-49 | IPR011682 |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 40 | 351 | 1.6E-94 | IPR000602 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 28 | 353 | 3.89E-110 | IPR011330 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 455 | 1003 | 8.16E-144 | IPR011013 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 355 | 450 | 8.17E-27 | IPR028995 |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 39 | 319 | 4.4E-121 | IPR027291 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 399 | 454 | 3.5E-19 | IPR037094 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 320 | 398 | 2.6E-30 | IPR037094 |
| Gene3D | G3DSA:2.60.40.1360 | - | 881 | 1004 | 2.1E-33 | - |
| Gene3D | G3DSA:2.60.40.1180 | - | 461 | 572 | 1.5E-26 | IPR013780 |
| Gene3D | G3DSA:2.70.98.30 | - | 593 | 860 | 1.3E-98 | - |
| SMART | SM00872 | Alpha_mann_mid_2 | 356 | 430 | 1.2E-20 | IPR015341 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26720.1 | Glycosyl hydrolase family 38 protein. | 0 |
| RefSeq | XP_010682958.2 | alpha-mannosidase At3g26720 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| P94078 | Alpha-mannosidase At3g26720 OS=Arabidopsis thaliana OX=3702 GN=At3g26720 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9CJX7 | Alpha-mannosidase OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology