Basic Information
Locus ID:
evm.TU.LG03.2233
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Lysosomal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 53773330 | 53794006 | + | evm.TU.LG03.2233 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 108,888.64 Da | 32.67 | 88.37 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 36 | 264 | 3.92525E-134 | - |
| Pfam | PF09261 | Alpha mannosidase middle domain | 306 | 398 | 2.0E-19 | IPR015341 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 547 | 762 | 1.5E-48 | IPR011682 |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 37 | 129 | 8.8E-28 | IPR000602 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 844 | 956 | 1.5E-9 | IPR041147 |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 131 | 301 | 1.2E-33 | IPR000602 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 305 | 400 | 3.92E-28 | IPR028995 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 403 | 959 | 1.73E-144 | IPR011013 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 25 | 302 | 7.78E-85 | IPR011330 |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 129 | 269 | 2.3E-45 | IPR027291 |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 36 | 128 | 8.8E-40 | IPR027291 |
| Gene3D | G3DSA:2.70.98.30 | - | 545 | 810 | 5.3E-94 | - |
| Gene3D | G3DSA:2.60.40.1180 | - | 419 | 544 | 5.8E-29 | IPR013780 |
| Gene3D | G3DSA:2.60.40.1360 | - | 831 | 964 | 2.5E-34 | - |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 349 | 404 | 2.6E-20 | IPR037094 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 270 | 348 | 9.3E-30 | IPR037094 |
| SMART | SM00872 | Alpha_mann_mid_2 | 306 | 380 | 2.6E-19 | IPR015341 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26720.1 | Glycosyl hydrolase family 38 protein. | 0 |
| RefSeq | XP_021736051.1 | alpha-mannosidase At3g26720-like isoform X1 [Chenopodium quinoa] | 0 |
| P94078 | Alpha-mannosidase At3g26720 OS=Arabidopsis thaliana OX=3702 GN=At3g26720 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9CJX7 | Alpha-mannosidase OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology