Basic Information
Locus ID:
evm.TU.LG03.21
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Short Name:
NIK2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 173496 | 179340 | - | evm.TU.LG03.21 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.23 | 71,204.90 Da | 36.72 | 92.08 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 326 | 592 | 7.1E-44 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 143 | 202 | 1.5E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 55 | 92 | 3.2E-12 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 55 | 211 | 1.16E-37 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 302 | 595 | 3.86E-76 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 52 | 233 | 6.9E-58 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 294 | 401 | 4.0E-38 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 402 | 614 | 1.5E-62 | - |
| SMART | SM00220 | serkin_6 | 325 | 594 | 6.6E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 325 | 604 | 35.113815 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 444 | 456 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 331 | 353 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 604 | 627 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 610 | 627 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G16000.1 | NSP-interacting kinase 1. NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP). | 0 |
| RefSeq | XP_021755463.1 | LOW QUALITY PROTEIN: protein NSP-INTERACTING KINASE 1-like [Chenopodium quinoa] | 0 |
| Q9LFS4 | Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana OX=3702 GN=NIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803L7E6 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology