Basic Information
Locus ID:
evm.TU.LG03.2072
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 48994947 | 48999947 | - | evm.TU.LG03.2072 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.85 | 41,673.28 Da | 36.32 | 93.67 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 198 | 327 | 2.3E-12 | IPR000782 |
| Pfam | PF02469 | Fasciclin domain | 38 | 111 | 1.5E-6 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 32 | 140 | 6.93E-17 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 182 | 328 | 7.19E-16 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 25 | 159 | 3.1E-11 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 189 | 328 | 1.1E-9 | IPR036378 |
| SMART | SM00554 | fasc_3 | 224 | 328 | 2.1E-13 | IPR000782 |
| SMART | SM00554 | fasc_3 | 62 | 177 | 3.7 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 26 | 173 | 10.933161 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 186 | 325 | 9.326416 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 336 | 370 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12730.1 | FASCICLIN-like arabinogalactan 2. AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds | 0 |
| RefSeq | XP_010689281.2 | fasciclin-like arabinogalactan protein 2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SU13 | Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLA2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7C9A1R3 | Gamma-glutamyltransferase OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology