Basic Information
Locus ID:
evm.TU.LG03.1907
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG03 | 40684864 | 40686213 | - | evm.TU.LG03.1907 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.96 | 49,153.60 Da | 30.40 | 81.63 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 94 | 446 | 3.54953E-80 | IPR034161 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 295 | 442 | 4.2E-22 | IPR032799 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 95 | 272 | 8.2E-54 | IPR032861 |
| SUPERFAMILY | SSF50630 | Acid proteases | 92 | 446 | 2.82E-84 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 82 | 271 | 2.3E-54 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 272 | 449 | 1.7E-41 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 95 | 442 | 40.378544 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 328 | 339 | - | IPR001969 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 110 | 121 | - | IPR001969 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 328 | 339 | 7.6E-5 | IPR001461 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 101 | 121 | 7.6E-5 | IPR001461 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G33340.1 | Eukaryotic aspartyl protease family protein. Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. | 0 |
| RefSeq | XP_006437358.1 | aspartic proteinase CDR1 [Citrus clementina] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 | |
| TrEMBL | V4SRZ0 | Peptidase A1 domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10033646mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology