Basic Information
Locus ID:
evm.TU.LG03.183
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
F-box-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 1867829 | 1869160 | + | evm.TU.LG03.183 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.14 | 50,751.94 Da | 32.71 | 80.45 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 3 | 43 | 1.1E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 56 | 1.44E-13 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 55 | 2.4E-6 | - |
| SMART | SM00256 | fbox_2 | 3 | 43 | 1.4E-7 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 1 | 43 | 10.875178 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06240.1 | F-box family protein. | 0 |
| RefSeq | XP_028774124.1 | F-box/kelch-repeat protein At3g06240-like [Prosopis alba] | 0 |
| Q8GXC7 | F-box/kelch-repeat protein At3g06240 OS=Arabidopsis thaliana OX=3702 GN=At3g06240 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7C9AYU5 | F-box domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G723400 |
| Portulacaceae | Portulaca oleracea | 23 | evm.TU.LG03.1144, evm.TU.LG03.179, evm.TU.LG03.180 ... |