Basic Information
Locus ID:
evm.TU.LG03.1655
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG03 | 36961079 | 36962407 | - | evm.TU.LG03.1655 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.32 | 50,207.60 Da | 43.56 | 82.51 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07830 | STKc_MAK_like | 4 | 287 | 6.66209E-150 | - |
| Pfam | PF00069 | Protein kinase domain | 4 | 287 | 3.6E-69 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 291 | 4.18E-88 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 83 | 8.1E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 85 | 320 | 4.0E-63 | - |
| SMART | SM00220 | serkin_6 | 4 | 287 | 5.8E-95 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 4 | 287 | 46.633026 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 122 | 134 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 10 | 33 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19110.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_022716872.1 | cyclin-dependent kinase F-4-like isoform X4 [Durio zibethinus] | 0 |
| Q6Z8C8 | Cyclin-dependent kinase F-4 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6P5WM67 | cyclin-dependent kinase F-4-like isoform X4 OS=Durio zibethinus OX=66656 GN=LOC111275645 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Nitrariaceae | Nitraria sibirica | 3 | evm.TU.LG03.1654, evm.TU.LG03.1655, evm.TU.LG03.2325 |