Basic Information
Locus ID:
evm.TU.LG03.1407
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Short Name:
LYK4
Description:
lysM domain receptor-like kinase 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 22405290 | 22407071 | + | evm.TU.LG03.1407 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 64,485.92 Da | 34.02 | 94.82 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 130 | 172 | 0.00420139 | IPR018392 |
| Pfam | PF00069 | Protein kinase domain | 315 | 569 | 9.9E-41 | IPR000719 |
| Pfam | PF01476 | LysM domain | 130 | 173 | 0.0074 | IPR018392 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 285 | 571 | 1.86E-67 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 279 | 370 | 3.5E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 371 | 584 | 5.1E-53 | - |
| SMART | SM00220 | serkin_6 | 312 | 576 | 2.7E-29 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 127 | 172 | 10.512722 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 249 | 575 | 33.347065 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 191 | 211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 190 | 217 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G33580.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_048501773.1 | lysM domain receptor-like kinase 4 [Beta vulgaris subsp. vulgaris] | 0 |
| O22808 | Protein LYK5 OS=Arabidopsis thaliana OX=3702 GN=LYK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7C9F754 | LysM domain receptor-like kinase 4 OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology