Basic Information
Locus ID:
evm.TU.LG03.1406
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Short Name:
LYK4
Description:
lysM domain receptor-like kinase 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 22386084 | 22388066 | + | evm.TU.LG03.1406 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.61 | 71,790.48 Da | 35.89 | 90.09 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01476 | LysM domain | 125 | 171 | 0.15 | IPR018392 |
| Pfam | PF00069 | Protein kinase domain | 382 | 636 | 1.7E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 353 | 638 | 8.47E-68 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 347 | 437 | 7.2E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 438 | 652 | 1.5E-52 | - |
| SMART | SM00220 | serkin_6 | 379 | 643 | 9.3E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 347 | 642 | 33.643879 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 190 | 238 | 8.746705 | IPR018392 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 123 | 170 | 8.725681 | IPR018392 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 277 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 281 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23770.1 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein. | 0 |
| RefSeq | XP_048501773.1 | lysM domain receptor-like kinase 4 [Beta vulgaris subsp. vulgaris] | 0 |
| O64825 | LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=LYK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9F754 | LysM domain receptor-like kinase 4 OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology