Basic Information
Locus ID:
evm.TU.LG03.1177
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG03 | 18295119 | 18298835 | + | evm.TU.LG03.1177 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 101,917.46 Da | 35.35 | 88.31 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 590 | 864 | 3.00467E-97 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 60 | 0.0089 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 587 | 860 | 9.9E-48 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 324 | 364 | 3.7E-4 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 34 | 297 | 2.3E-44 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 572 | 883 | 4.02E-80 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 325 | 433 | 1.7E-16 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 546 | 661 | 5.0E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 662 | 881 | 2.4E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 320 | 5.0E-74 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 323 | 451 | 1.3E-32 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 277 | 299 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 253 | 276 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 109 | 132 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 389 | 413 | 37.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 584 | 865 | 3.5E-45 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 584 | 864 | 39.947643 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 709 | 721 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 590 | 612 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 448 | 466 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 444 | 479 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 906 | 939 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01820.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_044489625.1 | receptor protein kinase TMK1-like [Mangifera indica] | 0 |
| Q9SIT1 | Receptor-like kinase TMK3 OS=Arabidopsis thaliana OX=3702 GN=TMK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2H5PHJ3 | Protein kinase domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_137280 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology