Basic Information
Locus ID:
evm.TU.LG03.1052
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Ubiquitin fusion degradation protein 1 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG03 | 13721955 | 13722908 | - | evm.TU.LG03.1052 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.09 | 35,203.37 Da | 44.09 | 73.82 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 11 | 182 | 1.5E-72 | IPR004854 |
| Gene3D | G3DSA:3.10.330.10 | - | 107 | 180 | 1.8E-32 | - |
| Gene3D | G3DSA:2.40.40.50 | - | 4 | 106 | 7.1E-37 | IPR042299 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 223 | 302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 242 | 294 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 185 | 204 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G29070.2 | Ubiquitin fusion degradation UFD1 family protein. | 0 |
| RefSeq | XP_031254973.1 | ubiquitin fusion degradation protein 1 homolog [Pistacia vera] | 0 |
| P70362 | Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Mus musculus OX=10090 GN=Ufd1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5C7IZ01 | Ubiquitin fusion degradation protein 1 homolog OS=Acer yangbiense OX=1000413 GN=EZV62_002693 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology