Basic Information
Locus ID:
evm.TU.LG03.1042
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG03 | 13568249 | 13573561 | + | evm.TU.LG03.1042 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 59,560.19 Da | 40.81 | 93.63 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 258 | 515 | 4.1E-41 | IPR000719 |
| Pfam | PF19160 | SPARK | 8 | 142 | 6.3E-13 | IPR043891 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 232 | 518 | 2.16E-70 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 218 | 327 | 5.6E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 329 | 534 | 2.9E-53 | - |
| SMART | SM00220 | serkin_6 | 254 | 522 | 3.7E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 254 | 522 | 36.753361 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 371 | 383 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59110.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_052295898.1 | probable LRR receptor-like serine/threonine-protein kinase At1g07550 [Citrus sinensis] | 0 |
| Q9SJG2 | Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana OX=3702 GN=At2g42960 PE=3 SV=1 | 0 | |
| TrEMBL | A0A6P6BFF5 | proline-rich receptor-like protein kinase PERK3 OS=Durio zibethinus OX=66656 GN=LOC111317667 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg34639, jg40355 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30022090, pistato.v30222550 |
| Apiaceae | Apium graveolens | 3 | Ag3G00848, Ag4G00791, Ag5G02204 |
| Arecaceae | Cocos nucifera | 1 | COCNU_11G009030 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103710072 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.598.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri13G21864, Ftri9G17997 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G1809 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl02G1885, Cgl07G0867 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG03.1042 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00034419 |
| Poaceae | Echinochloa crus-galli | 3 | AH09.1283, BH09.1395, CH09.1503 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_4AG0314320, gene-QOZ80_4BG0340750 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0174060.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_044524 |
| Poaceae | Oryza coarctata | 1 | Oco08G007930 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g39180.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G126100 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0302411, Pt_Chr0305334 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr23G011200, Chr26G008330, Chr30G008500 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G575000 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG048120, gene_TRIDC2BG050580 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G334300.1, TraesCS2B02G347500.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb080360_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-7461 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g21425 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_15_RagTag.735, evm.TU.Scaffold_6_RagTag.179 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-14995, nbisL1-mrna-26913 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-1642, nbisL1-mrna-653 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-144, nbisL1-mrna-15656 |
| Rhizophoraceae | Kandelia candel | 2 | add.evm.TU.utg000011l.38, evm.TU.utg000001l.396 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-11267 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-17773 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132639734 |
| Solanaceae | Solanum chilense | 2 | SOLCI003447300, SOLCI003618000 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107019177 |