Basic Information
Locus ID:
evm.TU.LG03.1034
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG03 | 13429785 | 13433278 | + | evm.TU.LG03.1034 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.97 | 40,935.88 Da | 45.06 | 78.73 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 63 | 329 | 2.77326E-112 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 57 | 329 | 1.7E-62 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 46 | 329 | 5.06E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 45 | 137 | 1.4E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 155 | 346 | 2.3E-64 | - |
| SMART | SM00220 | serkin_6 | 57 | 329 | 2.7E-64 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 30 | 342 | 3.7E-59 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 57 | 332 | 42.251484 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 196 | 208 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 152 | 165 | 1.4E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 190 | 208 | 1.4E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 300 | 322 | 1.4E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 256 | 278 | 1.4E-17 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50000.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006844952.1 | serine/threonine-protein kinase HT1 [Amborella trichopoda] | 0 |
| Q9FGB1 | Serine/threonine-protein kinase 52 OS=Arabidopsis thaliana OX=3702 GN=CBC2 PE=1 SV=1 | 0 | |
| TrEMBL | W1P9P3 | Protein kinase domain-containing protein OS=Amborella trichopoda OX=13333 GN=AMTR_s00058p00169420 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG03.1033, evm.TU.LG03.1034 |