Basic Information
Locus ID:
evm.TU.LG02.886
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 9852070 | 9858279 | - | evm.TU.LG02.886 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.92 | 48,796.02 Da | 33.74 | 93.94 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08268 | F-box associated domain | 256 | 349 | 1.9E-6 | IPR013187 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 190 | 393 | 1.7E-19 | IPR017451 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 11 | 81 | 4.5E-12 | IPR017451 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021733689.1 | F-box protein CPR30-like [Chenopodium quinoa] | 0 |
| TrEMBL | A0A7C9CLD5 | FBA_1 domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Portulacaceae | Portulaca oleracea | 5 | evm.TU.LG02.886, evm.TU.LG02.887, evm.TU.LG09.1089 ... |