Basic Information
Locus ID:
evm.TU.LG02.542
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
WD40-like Beta Propeller Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 5570573 | 5574429 | + | evm.TU.LG02.542 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.09 | 80,509.45 Da | 33.89 | 73.79 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 393 | 407 | 0.19 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 478 | 516 | 1.2E-8 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 609 | 624 | 0.062 | IPR011659 |
| SUPERFAMILY | SSF82171 | DPP6 N-terminal domain-like | 134 | 626 | 1.37E-25 | - |
| Gene3D | G3DSA:2.120.10.30 | - | 446 | 625 | 3.6E-21 | IPR011042 |
| Gene3D | G3DSA:2.120.10.30 | - | 133 | 345 | 2.7E-13 | IPR011042 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21670.1 | 0 | |
| RefSeq | XP_002524154.1 | uncharacterized protein LOC8274801 [Ricinus communis] | 0 |
| TrEMBL | B9SDT5 | Peptidase_S9 domain-containing protein OS=Ricinus communis OX=3988 GN=RCOM_1711490 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology