Basic Information
Locus ID:
evm.TU.LG02.538
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
WD40-like Beta Propeller Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 5472486 | 5476517 | + | evm.TU.LG02.538 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.37 | 80,821.35 Da | 36.77 | 69.82 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 385 | 398 | 0.15 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 470 | 503 | 1.6E-5 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 605 | 618 | 0.077 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 167 | 200 | 0.0054 | IPR011659 |
| SUPERFAMILY | SSF82171 | DPP6 N-terminal domain-like | 134 | 498 | 6.93E-21 | - |
| SUPERFAMILY | SSF82171 | DPP6 N-terminal domain-like | 520 | 620 | 3.3E-8 | - |
| Gene3D | G3DSA:2.120.10.30 | - | 362 | 618 | 7.6E-21 | IPR011042 |
| Gene3D | G3DSA:2.120.10.30 | - | 133 | 336 | 1.2E-12 | IPR011042 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21680.1 | DPP6 N-terminal domain-like protein. | 0 |
| RefSeq | XP_002524154.1 | uncharacterized protein LOC8274801 [Ricinus communis] | 0 |
| TrEMBL | A0A2P5FT00 | Tricorn protease OS=Trema orientale OX=63057 GN=TorRG33x02_031080 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology