Basic Information
Locus ID:
evm.TU.LG02.535
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
WD40-like Beta Propeller Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 5438082 | 5441241 | + | evm.TU.LG02.535 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 82,440.82 Da | 34.50 | 73.56 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 559 | 579 | 0.004 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 620 | 635 | 6.7E-4 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 398 | 410 | 0.038 | IPR011659 |
| SUPERFAMILY | SSF82171 | DPP6 N-terminal domain-like | 132 | 633 | 2.24E-26 | - |
| Gene3D | G3DSA:2.120.10.30 | - | 82 | 292 | 1.4E-12 | IPR011042 |
| Gene3D | G3DSA:2.120.10.30 | - | 582 | 694 | 1.2E-5 | IPR011042 |
| Gene3D | G3DSA:2.120.10.30 | - | 463 | 581 | 8.7E-14 | IPR011042 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21680.1 | DPP6 N-terminal domain-like protein. | 0 |
| RefSeq | XP_030508726.1 | uncharacterized protein LOC115723393 [Cannabis sativa] | 0 |
| TrEMBL | A0A803Q3R6 | Protein TolB OS=Cannabis sativa OX=3483 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology