Basic Information
Locus ID:
evm.TU.LG02.534
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
WD40-like Beta Propeller Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 5432900 | 5435497 | - | evm.TU.LG02.534 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 79,838.95 Da | 36.30 | 74.88 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 623 | 637 | 0.0021 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 400 | 412 | 0.053 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 560 | 581 | 2.1E-4 | IPR011659 |
| SUPERFAMILY | SSF82171 | DPP6 N-terminal domain-like | 131 | 636 | 7.65E-28 | - |
| Gene3D | G3DSA:2.120.10.30 | - | 122 | 268 | 5.8E-10 | IPR011042 |
| Gene3D | G3DSA:2.120.10.30 | - | 584 | 697 | 2.5E-5 | IPR011042 |
| Gene3D | G3DSA:2.120.10.30 | - | 396 | 583 | 2.8E-15 | IPR011042 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 48 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21680.1 | DPP6 N-terminal domain-like protein. | 0 |
| RefSeq | XP_030508726.1 | uncharacterized protein LOC115723393 [Cannabis sativa] | 0 |
| TrEMBL | A0A803Q3R6 | Protein TolB OS=Cannabis sativa OX=3483 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology