Basic Information
Locus ID:
evm.TU.LG02.525
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
WD40-like Beta Propeller Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 5305303 | 5309956 | + | evm.TU.LG02.525 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.10 | 88,824.28 Da | 32.41 | 73.93 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 560 | 577 | 0.0016 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 621 | 634 | 0.09 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 402 | 414 | 0.12 | IPR011659 |
| SUPERFAMILY | SSF82171 | DPP6 N-terminal domain-like | 143 | 635 | 5.49E-31 | - |
| Gene3D | G3DSA:2.120.10.30 | - | 142 | 318 | 2.5E-9 | IPR011042 |
| Gene3D | G3DSA:2.120.10.30 | - | 421 | 647 | 1.5E-20 | IPR011042 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21680.1 | DPP6 N-terminal domain-like protein. | 0 |
| RefSeq | XP_030508726.1 | uncharacterized protein LOC115723393 [Cannabis sativa] | 0 |
| TrEMBL | A0A803Q3R6 | Protein TolB OS=Cannabis sativa OX=3483 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology