Basic Information
Locus ID:
evm.TU.LG02.2848
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
proteinaceous RNase P 1, chloroplastic mitochondrial-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 59475735 | 59492174 | - | evm.TU.LG02.2848 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.13 | 130,390.06 Da | 41.46 | 76.65 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00609 | AAT_like | 804 | 1171 | 6.54955E-43 | - |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 316 | 462 | 3.0E-54 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 505 | 730 | 2.3E-74 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 203 | 260 | 1.1E-15 | IPR033443 |
| Pfam | PF00155 | Aminotransferase class I and II | 802 | 1169 | 8.1E-92 | IPR004839 |
| SUPERFAMILY | SSF53383 | PLP-dependent transferases | 773 | 1176 | 1.78E-117 | IPR015424 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 315 | 733 | 2.3E-195 | IPR011990 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 208 | 259 | 1.2E-11 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 522 | 696 | 2.3E-195 | - |
| Gene3D | G3DSA:3.40.640.10 | - | 836 | 1077 | 1.7E-169 | IPR015421 |
| Gene3D | G3DSA:3.90.1150.10 | Aspartate Aminotransferase, domain 1 | 780 | 1169 | 1.7E-169 | IPR015422 |
| PRINTS | PR00799 | Aspartate aminotransferase signature | 1118 | 1136 | 4.1E-36 | IPR000796 |
| PRINTS | PR00799 | Aspartate aminotransferase signature | 951 | 970 | 4.1E-36 | IPR000796 |
| PRINTS | PR00799 | Aspartate aminotransferase signature | 1050 | 1075 | 4.1E-36 | IPR000796 |
| PRINTS | PR00799 | Aspartate aminotransferase signature | 982 | 994 | 4.1E-36 | IPR000796 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 739 | 760 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 298 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 305 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19550.1 | aspartate aminotransferase 2. Nitrogen metabolism. Major cytosolic isoenzyme controlling aspartate biosynthesis in the light. | 0 |
| RefSeq | XP_010688235.1 | proteinaceous RNase P 1, chloroplastic/mitochondrial isoform X3 [Beta vulgaris subsp. vulgaris] | 0 |
| P37833 | Aspartate aminotransferase, cytoplasmic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0760600 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6A6LX88 | Aspartate aminotransferase OS=Hevea brasiliensis OX=3981 GN=GH714_039164 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology