Basic Information
Locus ID:
evm.TU.LG02.2780
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Lysosomal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG02 | 48384641 | 48391946 | + | evm.TU.LG02.2780 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.75 | 113,246.37 Da | 33.65 | 81.35 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 41 | 317 | 5.84574E-179 | - |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 42 | 353 | 3.6E-94 | IPR000602 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 603 | 814 | 1.0E-51 | IPR011682 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 896 | 1002 | 3.6E-10 | IPR041147 |
| Pfam | PF09261 | Alpha mannosidase middle domain | 358 | 447 | 1.8E-17 | IPR015341 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 464 | 1005 | 2.83E-143 | IPR011013 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 30 | 354 | 5.72E-111 | IPR011330 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 358 | 456 | 1.86E-25 | IPR028995 |
| Gene3D | G3DSA:2.60.40.1360 | - | 883 | 1005 | 2.9E-32 | - |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 322 | 400 | 7.3E-30 | IPR037094 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 401 | 456 | 1.7E-19 | IPR037094 |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 41 | 321 | 2.2E-120 | IPR027291 |
| Gene3D | G3DSA:2.60.40.1180 | - | 468 | 578 | 2.1E-24 | IPR013780 |
| Gene3D | G3DSA:2.70.98.30 | - | 599 | 862 | 4.2E-101 | - |
| SMART | SM00872 | Alpha_mann_mid_2 | 358 | 432 | 1.2E-20 | IPR015341 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66150.2 | - | 0 |
| RefSeq | XP_024035847.1 | alpha-mannosidase isoform X1 [Citrus clementina] | 0 |
| Q9FKW9 | Probable alpha-mannosidase At5g66150 OS=Arabidopsis thaliana OX=3702 GN=At5g66150 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5N6QU88 | Alpha-mannosidase OS=Carpinus fangiana OX=176857 GN=FH972_006989 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology