Basic Information
Locus ID:
evm.TU.LG02.2645
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG02 | 46724367 | 46730733 | - | evm.TU.LG02.2645 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.95 | 45,067.31 Da | 45.74 | 66.24 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 108 | 409 | 2.1E-88 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 296 | 399 | 2.31E-21 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 295 | 412 | 2.2E-43 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 298 | 400 | 26.783659 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 247 | 262 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 263 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65670.2 | indole-3-acetic acid inducible 9. auxin (indole-3-acetic acid) induced gene | 0 |
| RefSeq | XP_031260494.1 | auxin-responsive protein IAA9 isoform X1 [Pistacia vera] | 0 |
| Q38827 | Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7HUT5 | Auxin-responsive protein OS=Acer yangbiense OX=1000413 GN=EZV62_014599 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology