Basic Information
Locus ID:
evm.TU.LG02.2628
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG02 | 46452856 | 46456221 | - | evm.TU.LG02.2628 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.23 | 108,633.24 Da | 34.84 | 101.51 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 688 | 899 | 1.4E-44 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 147 | 207 | 4.0E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 70 | 1.6E-7 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 316 | 626 | 7.82E-49 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 78 | 398 | 3.53E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 677 | 974 | 4.32E-73 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 186 | 1.6E-38 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 187 | 287 | 5.1E-25 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 671 | 763 | 3.3E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 764 | 981 | 2.9E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 294 | 626 | 3.3E-90 | IPR032675 |
| SMART | SM00365 | LRR_sd22_2 | 243 | 269 | 3.7 | - |
| SMART | SM00220 | serkin_6 | 686 | 974 | 2.2E-32 | IPR000719 |
| SMART | SM00365 | LRR_sd22_2 | 482 | 511 | 300.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 194 | 221 | 140.0 | - |
| SMART | SM00369 | LRR_typ_2 | 267 | 291 | 90.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 554 | 578 | 74.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 170 | 194 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 530 | 553 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 482 | 506 | 38.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 243 | 266 | 170.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 686 | 979 | 38.039555 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 692 | 714 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 810 | 822 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65710.1 | HAESA-like 2. | 0 |
| RefSeq | XP_006426174.1 | LRR receptor-like serine/threonine-protein kinase HSL2 [Citrus clementina] | 0 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 0 | |
| TrEMBL | V4UJ76 | Protein kinase domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10026946mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology