Basic Information
Locus ID:
evm.TU.LG02.238
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Domain of unknown function (DUF3598)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG02 | 2467186 | 2469977 | - | evm.TU.LG02.238 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.18 | 56,777.40 Da | 50.40 | 60.75 | -0.88 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 407 | 464 | 6.3E-26 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 230 | 285 | 2.9E-24 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 398 | 466 | 6.28E-30 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 225 | 287 | 2.22E-25 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 216 | 288 | 5.7E-27 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 391 | 467 | 9.7E-36 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 228 | 286 | 8.2E-35 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 406 | 465 | 2.5E-39 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 401 | 466 | 37.91795 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 223 | 287 | 23.720404 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 348 | 369 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 84 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 316 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 278 | 316 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 106 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 348 | 381 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 203 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_044468388.1 | probable WRKY transcription factor 4 [Mangifera indica] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A067FZC2 | WRKY transcription factor 3 OS=Citrus sinensis OX=2711 GN=CISIN_1g010802mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology