Basic Information
Locus ID:
evm.TU.LG02.233
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
CSC1-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG02 | 2399082 | 2415382 | + | evm.TU.LG02.233 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.53 | 131,172.19 Da | 43.52 | 107.42 | 0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14703 | Cytosolic domain of 10TM putative phosphate transporter | 188 | 343 | 5.7E-33 | IPR027815 |
| Pfam | PF13967 | Late exocytosis, associated with Golgi transport | 6 | 165 | 5.4E-39 | IPR032880 |
| Pfam | PF02714 | Calcium-dependent channel, 7TM region, putative phosphate | 356 | 621 | 1.9E-70 | IPR003864 |
| SUPERFAMILY | SSF81383 | F-box domain | 719 | 766 | 8.11E-7 | IPR036047 |
| SMART | SM00256 | fbox_2 | 726 | 766 | 0.0071 | IPR001810 |
| Coils | Coil | Coil | 232 | 252 | - | - |
Gene Ontology
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01100.1 | hypothetical protein 1. unknown protein, has cDNAs and ESTs associated to it | 0 |
| RefSeq | XP_006482642.1 | CSC1-like protein HYP1 [Citrus sinensis] | 0 |
| Q8GUH7 | CSC1-like protein HYP1 OS=Arabidopsis thaliana OX=3702 GN=HYP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2H5PK73 | CSC1-like protein HYP1 OS=Citrus unshiu OX=55188 GN=CUMW_144370 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology