Basic Information
Locus ID:
evm.TU.LG02.2264
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
lysM domain receptor-like kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG02 | 42408694 | 42410583 | - | evm.TU.LG02.2264 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 70,503.40 Da | 44.31 | 90.62 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 188 | 231 | 9.19606E-4 | IPR018392 |
| Pfam | PF01476 | LysM domain | 190 | 232 | 3.3E-5 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 373 | 609 | 3.5E-38 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 327 | 615 | 9.54E-62 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 318 | 410 | 6.6E-13 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 187 | 243 | 8.8E-7 | IPR036779 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 412 | 625 | 2.4E-53 | - |
| SMART | SM00257 | LysM_2 | 188 | 232 | 0.0052 | IPR018392 |
| SMART | SM00257 | LysM_2 | 122 | 168 | 1.7 | IPR018392 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 187 | 231 | 10.365554 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 292 | 614 | 30.265854 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 235 | 256 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23770.1 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein. | 0 |
| RefSeq | XP_031270733.1 | lysM domain receptor-like kinase 4 [Pistacia vera] | 0 |
| O64825 | LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=LYK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7HR92 | LysM domain receptor-like kinase 4 OS=Acer yangbiense OX=1000413 GN=EZV62_014136 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology