Basic Information
Locus ID:
evm.TU.LG02.2178
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG02 | 41494282 | 41498469 | - | evm.TU.LG02.2178 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.93 | 69,193.02 Da | 44.20 | 78.37 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 165 | 427 | 8.10608E-131 | - |
| Pfam | PF00069 | Protein kinase domain | 166 | 428 | 2.5E-70 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 456 | 610 | 6.36E-17 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 163 | 460 | 7.96E-85 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 159 | 254 | 1.1E-23 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 446 | 537 | 1.5E-18 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 453 | 607 | 1.5E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 255 | 439 | 8.6E-60 | - |
| SMART | SM00220 | serkin_6 | 166 | 428 | 2.9E-101 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 470 | 505 | 9.101698 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 166 | 428 | 51.777802 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 290 | 302 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 172 | 198 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 72 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50530.1 | CDPK-related kinase. CDPK-related kinase | 0 |
| RefSeq | XP_006425849.1 | CDPK-related kinase 5 [Citrus clementina] | 0 |
| Q9SCS2 | CDPK-related kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A067GKW0 | Protein kinase domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g007253mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology