Basic Information
Locus ID:
evm.TU.LG02.2125
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
F-box LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG02 | 40632669 | 40636853 | - | evm.TU.LG02.2125 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.10 | 67,440.22 Da | 36.52 | 102.50 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 57 | 90 | 3.4E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 55 | 114 | 3.66E-10 | IPR036047 |
| SUPERFAMILY | SSF52058 | L domain-like | 194 | 441 | 9.52E-8 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 185 | 500 | 1.1E-7 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 57 | 96 | 1.2E-5 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 55 | 114 | 8.941087 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G58900.3 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_031285202.1 | putative FBD-associated F-box protein At5g56410 [Pistacia vera] | 0 |
| Q93ZX6 | F-box/LRR-repeat protein At3g58900 OS=Arabidopsis thaliana OX=3702 GN=At3g58900 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2H5PFS6 | F-box domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_132510 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology