Basic Information
Locus ID:
evm.TU.LG02.1785
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Hippocampus abundant transcript-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 28558844 | 28570571 | - | evm.TU.LG02.1785 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.28 | 46,954.81 Da | 39.60 | 105.66 | 0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 10 | 416 | 5.30655E-59 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 10 | 376 | 3.8E-28 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 10 | 409 | 1.23E-39 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 6 | 413 | 6.8E-43 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 10 | 422 | 13.185279 | IPR020846 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 50 | 69 | 4.4E-5 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 360 | 383 | 4.4E-5 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 142 | 164 | 4.4E-5 | IPR001958 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_021753018.1 | hippocampus abundant transcript 1 protein-like [Chenopodium quinoa] | 0 |
| Q96MC6 | Hippocampus abundant transcript 1 protein OS=Homo sapiens OX=9606 GN=MFSD14A PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9QD99 | MFS domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_192340 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology