halophFGD

Basic Information

Locus ID: evm.TU.LG02.1381

Species & Taxonomic ID: Portulaca oleracea & 46147

Genome Assembly: GWHCBIU00000000

Short Name: FT

Description: flowering locus

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr2	17609611	17612087	+	evm.TU.LG02.1381

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.60	56,711.49 Da	35.94	89.07	-0.11

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00866	PEBP_euk	24	100	5.73928E-20	IPR035810
Pfam	PF01161	Phosphatidylethanolamine-binding protein	51	94	1.7E-6	IPR008914
SUPERFAMILY	SSF81383	F-box domain	100	163	9.94E-11	IPR036047
SUPERFAMILY	SSF49777	PEBP-like	10	102	1.24E-24	IPR036610
Gene3D	G3DSA:1.20.1280.50	-	102	137	5.4E-6	-
Gene3D	G3DSA:3.90.280.10	-	2	101	6.7E-25	IPR036610
ProSitePatterns	PS01220	Phosphatidylethanolamine-binding protein family signature.	62	84	-	IPR001858

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K16223 (protein FLOWERING LOCUS T)

Pathway:

ko04712 (Circadian rhythm - plant) map04712 (Circadian rhythm - plant)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G65480.1	PEBP (phosphatidylethanolamine-binding protein) family protein. FT, together with LFY, promotes flowering and is antagonistic with its homologous gene, TERMINAL FLOWER1 (TFL1). FT is expressed in leaves and is induced by long day treatment. Either the FT mRNA or protein is translocated to the shoot apex where it induces its own expression. Recent data suggests that FT protein acts as a long-range signal. FT is a target of CO and acts upstream of SOC1.
RefSeq	XP_048496808.1	F-box protein At5g49610 [Beta vulgaris subsp. vulgaris]
Swiss-Prot	I1H0V9	Protein VERNALIZATION 3 OS=Brachypodium distachyon OX=15368 GN=VRN3 PE=2 SV=1
TrEMBL	A0A0J8B5K5	F-box domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_000050 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	1	jg9317
Aizoaceae	Mesembryanthemum crystallinum	32	gene_11432, gene_12899, gene_16124, gene_16294, gene_17039 ... gene_17180, gene_17196, gene_17197, gene_17200, gene_18016, gene_18021, gene_18965, gene_19195, gene_19366, gene_22440, gene_22441, gene_24323, gene_24456, gene_25700, gene_26294, gene_26297, gene_296, gene_3365, gene_3511, gene_3514, gene_3681, gene_3682, gene_3683, gene_4787, gene_8042, gene_8044, gene_9777
Amaranthaceae	Atriplex hortensis	6	Ah009392, Ah018492, Ah018497, Ah018498, Ah035583, Ah035814
Amaranthaceae	Beta vulgaris	1	BVRB_8g192230
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg55775, Sbi_jg55776
Amaranthaceae	Salicornia europaea	2	Seu_jg26284, Seu_jg26285
Amaranthaceae	Suaeda aralocaspica	4	GOSA_00017849, GOSA_00017850, GOSA_00022226, GOSA_00022227
Amaranthaceae	Suaeda glauca	5	Sgl01211, Sgl06296, Sgl06297, Sgl43382, Sgl48185
Amaranthaceae	Chenopodium album	7	gene:ENSEOMG00000000754, gene:ENSEOMG00000003575 ... gene:ENSEOMG00000006068, gene:ENSEOMG00000024464, gene:ENSEOMG00000031153, gene:ENSEOMG00000043576, gene:ENSEOMG00000045556
Amaranthaceae	Chenopodium quinoa	6	CQ.Regalona.r1.3AG0006140, CQ.Regalona.r1.3AG0006160 ... CQ.Regalona.r1.3BG0006260, CQ.Regalona.r1.3BG0006270, CQ.Regalona.r1.3BG0015330, CQ.Regalona.r1.6AG0014300
Apiaceae	Apium graveolens	1	Ag3G00815
Asparagaceae	Asparagus officinalis	1	AsparagusV1_01.443.V1.1
Asteraceae	Flaveria trinervia	2	Ftri13G27858, Ftri18G32677
Casuarinaceae	Casuarina equisetifolia	1	Ceq03G2689
Casuarinaceae	Casuarina glauca	1	Cgl03G2822
Nitrariaceae	Nitraria sibirica	4	evm.TU.LG02.136, evm.TU.LG04.1772, evm.TU.LG04.1773 ... evm.TU.LG04.1774
Plantaginaceae	Plantago ovata	1	Pov_00027119
Portulacaceae	Portulaca oleracea	9	evm.TU.LG02.1381, evm.TU.LG04.894, evm.TU.LG04.895 ... evm.TU.LG09.587, evm.TU.LG10.21, evm.TU.LG11.1317, evm.TU.LG11.1318, evm.TU.LG11.1319, evm.TU.LG11.1320
Rhizophoraceae	Bruguiera sexangula	6	evm.TU.31081.1, evm.TU.Scaffold_18_RagTag.639 ... evm.TU.Scaffold_18_RagTag.722, evm.TU.Scaffold_1_RagTag.146, evm.TU.Scaffold_2_RagTag.2025, evm.TU.Scaffold_5_RagTag.829
Rhizophoraceae	Carallia pectinifolia	24	nbisL1-mrna-17670, nbisL1-mrna-19273, nbisL1-mrna-20346 ... nbisL1-mrna-20558, nbisL1-mrna-21078, nbisL1-mrna-21079, nbisL1-mrna-22506, nbisL1-mrna-27543, nbisL1-mrna-27551, nbisL1-mrna-27580, nbisL1-mrna-27584, nbisL1-mrna-27659, nbisL1-mrna-27660, nbisL1-mrna-27730, nbisL1-mrna-27740, nbisL1-mrna-27771, nbisL1-mrna-27782, nbisL1-mrna-31027, nbisL1-mrna-3389, nbisL1-mrna-3448, nbisL1-mrna-3449, nbisL1-mrna-3450, nbisL1-mrna-3451, nbisL1-mrna-7985
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-15588, nbisL1-mrna-19249
Rhizophoraceae	Ceriops zippeliana	2	nbisL1-mrna-11465, nbisL1-mrna-13714
Rhizophoraceae	Kandelia candel	3	add.evm.TU.utg000009l.26, add.evm.TU.utg000012l.40 ... add.evm.TU.utg000023l.12
Rhizophoraceae	Kandelia obovata	1	Maker00005027
Rhizophoraceae	Rhizophora apiculata	2	nbisL1-mrna-19727, nbisL1-mrna-19901
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-136, nbisL1-mrna-14828, nbisL1-mrna-22879 ... nbisL1-mrna-24313
Salicaceae	Populus euphratica	4	populus_peu18487, populus_peu18522, populus_peu36623 ... populus_peu36624
Solanaceae	Lycium barbarum	5	gene-LOC132599988, gene-LOC132606524, gene-LOC132624588 ... gene-LOC132628775, gene-LOC132633271
Solanaceae	Solanum chilense	1	SOLCI002997200
Solanaceae	Solanum pennellii	1	gene-LOC107032338
Tamaricaceae	Reaumuria soongarica	2	STRG.19857_chr07_+, STRG.6052_chr04_-
Tamaricaceae	Tamarix chinensis	2	TC06G2719, TC08G0531