Basic Information
Locus ID:
evm.TU.LG02.1375
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 17466422 | 17474230 | - | evm.TU.LG02.1375 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.14 | 104,758.95 Da | 35.91 | 77.88 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00028 | B_lectin | 262 | 407 | 2.43421E-22 | IPR001480 |
| CDD | cd01098 | PAN_AP_plant | 579 | 626 | 8.0222E-11 | - |
| Pfam | PF08276 | PAN-like domain | 581 | 613 | 2.4E-8 | IPR003609 |
| Pfam | PF01453 | D-mannose binding lectin | 328 | 432 | 3.3E-26 | IPR001480 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 327 | 471 | 6.41E-20 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 742 | 803 | 4.47E-11 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 141 | 200 | 3.9E-11 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 738 | 804 | 9.0E-11 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 247 | 404 | 1.1E-11 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 805 | 893 | 1.1E-7 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 132 | 222 | 8.0E-18 | - |
| SMART | SM00108 | blect_4 | 259 | 407 | 3.8E-19 | IPR001480 |
| SMART | SM00473 | ntp_6 | 553 | 633 | 1.9E-6 | IPR003609 |
| PIRSF | PIRSF000641 | SRK | 800 | 925 | 6.4E-23 | IPR024171 |
| PIRSF | PIRSF000641 | SRK | 527 | 801 | 1.7E-32 | IPR024171 |
| PIRSF | PIRSF000641 | SRK | 239 | 538 | 4.7E-42 | IPR024171 |
| PIRSF | PIRSF000641 | SRK | 99 | 197 | 2.7E-19 | IPR024171 |
| PIRSF | PIRSF000641 | SRK | 11 | 126 | 0.13 | IPR024171 |
| PIRSF | PIRSF000641 | SRK | 196 | 252 | 0.01 | IPR024171 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 554 | 631 | 8.650633 | IPR003609 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 253 | 399 | 11.583911 | IPR001480 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 770 | 792 | - | IPR017441 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67520.2 | - | 0 |
| RefSeq | XP_010666132.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LW83 | G-type lectin S-receptor-like serine/threonine-protein kinase CES101 OS=Arabidopsis thaliana OX=3702 GN=CES101 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0J8B5L4 | Non-specific serine/threonine protein kinase OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_000150 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 6 | jg18161, jg18162, jg18163, jg18164, jg18165, jg23599 |
| Anacardiaceae | Pistacia vera | 10 | pistato.v30014320, pistato.v30036750, pistato.v30036760 ... |
| Apiaceae | Apium graveolens | 1 | AgUnG01050 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G18470.1 |
| Brassicaceae | Brassica nigra | 3 | BniB05g045300.2N, BniB08g009250.2N, BniB08g009270.2N |
| Plantaginaceae | Plantago ovata | 4 | Pov_00016931, Pov_00029256, Pov_00029257, Pov_00041214 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG02.1374, evm.TU.LG02.1375, evm.TU.LG09.595 ... |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_1_RagTag.347, evm.TU.Scaffold_8_RagTag.280 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-3277 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-3165 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-13833 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-21937 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-16308 |
| Salicaceae | Populus euphratica | 5 | populus_peu00251, populus_peu00252, populus_peu00253 ... |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132635386, gene-LOC132637212 |